Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912736.1_cds_XP_016462817.1_56002
CDS Infomation

[gene=LOC107785915] [db_xref=GeneID:107785915] [protein=protein GDAP2 homolog] [protein_id=XP_016462817.1] [location=join(247..549,3679..3756,3992..4047,8284..8403,8567..8637,8867..8960,9081..9287,10207..10458,10702..10810,10953..11020,11595..11664,11766..11840,11937..12028,12227..12302)] [gbkey=CDS]
Sequence

ATGTATCGGCCTGTGCCTACTACTACTCGAGGTGGGGTACCTACAGATAGTGGAGATCCT
GTGGTTACACTGGACCAAGTTCCATGTTGGAGTAATGCTGAATTTAGATACTCATATGAG
AATGAAGATCCTTCTAATTCATACTTCCCGGATCCTTTGGCATCTGCCTCTGGGTCTGAG
GGCAATGCAAGTAGCATGGTTTCCAAGTTTCCCCTGAATCATGAGATTAACTCCAAGATA
TACCTGTGGAGAGGAGACCCCTGGAATCTCGAGGTAGATGCTGTCGTTAACTCTACTAAT
GAGAACTTAGATGAAGCACACAGCAGCCCTGGATTGCATGCTGCAGCCGGACCTGGTCTT
GCAGAAGAATGTGCCACACTGGGAGGCTGCCGAACAGGAATGGCAAAAGTTACAAATGCT
TATGATCTTCCTGCTAGGAGGGTCATACACACTGTTGGTCCCAAATATGCTGTAAAATAT
CATACTGCTGCAGAGAATGCTCTAAGCCATTGCTATCGCTCTTGTCTCGAGCTTCTAATA
GAAAATGGGCTCAAGAGCATTGCTATGGGCTGTATATACACAGAAGCAAAAAATTACCCA
CGAGAACCAGCTGCTCATGTGGCAATAAGAACTGTACGACGGTTCATTGAGAAACAGAAA
GATAAAATAGAGGCAGTTGTTTTCTGTACAGCTACATCATCGGATACAGAGATTTATAAA
AGATTGCTTCCGCTCTACTTTCCTCGGGATAAGCATGAAGAGGAAGTTGCCCTATTAAAA
CTTCCTGCAGATGTTGGGGATGAGAATGGGGAGACAACTATAGATGAACGTAAAATTAGA
ATAAAACCGTTACCGAATGCAAAAAAGTCCAGTCCAAGGGTTCCGCAGGCCTCTGTTGAT
CTTTCCGTCAGTAATGTTGGTTTGACCAGGAGCTCATCCTATTTGGATGCTTTTCTGGAC
CCTGCTTTTATGTCCTTGATCAAGGACCCTGATCAGCGACGGAGAGAACAATGGGAAAAA
ACTGCCCAGGCACAAACTAGTTGGAACTTCTTTAAAATGCTTGGATATGGTGATGTTGCA
GGACCGCCTTTGTCACCCGCAGAAGAATACTCGCTTCATTCTAGATATCTTGCAAAAGCA
AATACTCTGAACCTTTCAGAAATTGCAGAAATGAAAATTGTCTACCGAGGAGGGGTTGAC
AGTGAAGGTCGTCCAGTAATGGTTGTTGTGGGGGCACATTTCCTGCTAAGATGTCTTGAT
CTTGAGAGATTTATTCTCCATGTTGTAAAGGAGTTCGAACCATTAATACAGAAGCCTTAC
TCTATTGTGTACTTCCATTCTGCTGCAACCTTACAGATACAACCAGATCTAGGATTGATG
AAGAGAATACAACAAATACTCGGCCGCAAGCACCAGCGCAACCTTCATGCGATATATGTT
CTTCACCCTACTTTTGGACTGAAGAGTGCAATAGTTGCACTACAGCTCTTTGTGGATAAT
GTGGTATGGAAAAAAGTAGTGTATGTAGATCGTCTTCTGCAACTATTCCGCTATGTTCCT
CGTGAACAGCTAACCATCCCAGATTTTGTATTCCAGCATGATTTGGAAGTAAATGGAGGG
AAGGGCCTAATTGTGGATCCAAGAACTAAGTATGTTTATCAGAGACCATAG

Peptide Sequence

PEP ID

XP_016462817.1
PEP Infomation

PREDICTED: protein GDAP2 homolog [Nicotiana tabacum]
Sequence

MYRPVPTTTRGGVPTDSGDPVVTLDQVPCWSNAEFRYSYENEDPSNSYFPDPLASASGSE
GNASSMVSKFPLNHEINSKIYLWRGDPWNLEVDAVVNSTNENLDEAHSSPGLHAAAGPGL
AEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLI
ENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFIEKQKDKIEAVVFCTATSSDTEIYK
RLLPLYFPRDKHEEEVALLKLPADVGDENGETTIDERKIRIKPLPNAKKSSPRVPQASVD
LSVSNVGLTRSSSYLDAFLDPAFMSLIKDPDQRRREQWEKTAQAQTSWNFFKMLGYGDVA
GPPLSPAEEYSLHSRYLAKANTLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLD
LERFILHVVKEFEPLIQKPYSIVYFHSAATLQIQPDLGLMKRIQQILGRKHQRNLHAIYV
LHPTFGLKSAIVALQLFVDNVVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGG
KGLIVDPRTKYVYQRP

Transcript Sequence

Gene sequence data has not been registered.